POMELO II
(THE RETURN OF THE POMELO)


UPLOAD DATA
Expression data file
Class labels or dependent variable
Censored indicator

TEST OPTIONS
Select test
Number of permutations


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Move mouse over item to get added information or click here for the long help file. See VIDEO TUTORIALS. Or TRY IT OUT with sample data sets.


Main help

Go to main help

Pomelo II has been developed by Edward R. Morrissey, currently at the University of Warwick, and Ramon Diaz-Uriarte, at IIB and UAM. Pomelo II is maintained (or kept alive) by Ramon Diaz-Uriarte.

If you use Pomelo II, please cite it in your papers. The reference for Pomelo II is Morrissey E, Diaz-Uriarte R. 2009. Pomelo II: finding differentially expressed genes. Nucleic Acids Research, 37, No. suppl_2 W581-W586.



UPDATE and disk image availability: Minor updates fixing/updating some links, improving some of the logic, using R-4.5.1, and allowing to use https, on September and October 2025. I have a QCOW2 disk image containing pomelo2, signs2, genesrf, and tnasas, along with a libvirt XML configuration file. This would let you run the environment locally using KVM/QEMU and modify the setup as needed. Let me know if you'd like a copy. (Note, though, that most of the code is from over 15 years ago, and it is still using Python 2.7. The code would benefit from a major clean up, so this was just a minimal, hackish intervention to allow reviving the apps on a virtual machine).